Alignment of alleles: Atlantic cod (Gadus morhua) IGIV1S5

When several alleles are shown, the nucleotide mutations and amino acid changes for a given codon are indicated in red letters. These polymorphic mutations are reported in Tables of alleles.
Dashes indicate identical nucleotides. Dots indicate gaps according to the IMGT unique numbering. Blanks indicate partial sequences (blanks at the 5' and/or 3' end).

                                  1   2   3   4   5   6   7   8   9  10  11  12  13  14  15  16  17  18  19  20
                                 Q   V   T   V   T   Q   T   P   V       V   S   V   N   P   G   S   T   V   T
  AJ225255,IGIV1S5*01           CAG GTG ACT GTG ACT CAG ACA CCA GTA ... GTG TCC GTT AAT CCA GGA TCC ACA GTC ACT

                                                         __________________CDR1-IMGT____________________
                                 21  22  23  24  25  26  27  28  29  30  31  32  33  34  35  36  37  38  39  40
                                 L   T   C   K   I   N   P   A   V   Y   R   H   S   S   L   G   D   Y   L   F
  AJ225255,IGIV1S5*01           CTG ACC TGT AAA ATA AAC CCA GCG GTT TAT AGA CAT TCT TCT TTA GGT GAT TAT CTA TTC

                                                                                             ______________CDR2-
                                 41  42  43  44  45  46  47  48  49  50  51  52  53  54  55  56  57  58  59  60
                                 W   Y   Q   Q   K   P   G   E   A   P   K   L   I   V   K   L   V   N
  AJ225255,IGIV1S5*01           TGG TAC CAA CAG AAA CCT GGA GAA GCC CCC AAG CTC ATC GTA AAA TTA GTA AAC ... ...

                                IMGT________________
                                 61  62  63  64  65  66  67  68  69  70  71  72  73  74  75  76  77  78  79  80
                                                     Q   L   V   S   P   T   P       A   R   F   S   G   S   G
  AJ225255,IGIV1S5*01           ... ... ... ... ... CAA CTT GTA TCA CCA ACA CCA ... GCT CGG TTT AGT GGC AGT GGA

                                 81  82  83  84  85  86  87  88  89  90  91  92  93  94  95  96  97  98  99 100
                                         S   S   T   D   F   S   L   T   I   N   G   A   Q   R   E   D   A   A
  AJ225255,IGIV1S5*01           ... ... AGC AGC ACT GAC TTC TCT CTG ACC ATC AAC GGC GCC CAG CGC GAA GAC GCA GCA

                                                ____________CDR3-IMGT______________
                                101 102 103 104 105 106 107 108 109 110 111 112 113
                                 V   Y   H   C   Q   S   Y   H   S   S   G   N   V
  AJ225255,IGIV1S5*01           GTT TAT CAC TGT CAG AGT TAC CAT AGC AGT GGC AAT GTG  #c
#c: rearranged cDNA

This alignment has been generated with the IMGT/AlleleAlign tool developed by Mehdi Yousfi (31/07/2001)

Created: 21/03/2002
Last updated: Friday, 22-Sep-2023 18:24:47 CEST
Author: Nathalie Bosc